Flavobacterium indicum GPTSA100-9 = DSM 17447

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium indicum GPTSA100-9, also known as DSM 17447, is an aerobic, rod-shaped bacterium characterized by the presence of flagella. This motility feature may facilitate its movement in various aquatic environments, contributing to its ecological adaptability. The organism possesses a single replicon, indicating a streamlined genomic architecture, which can be advantageous for efficient replication and survival under aerobic conditions. The strain has been assigned the accession number NC_017025.1, which allows for its genomic information to be accessed and studied in detail, providing insights into its metabolic capabilities and ecological roles. As an aerobic bacterium, F. indicum likely plays a role in the degradation of organic matter in oxygen-rich environments, contributing to nutrient cycling and the maintenance of ecosystem health. In summary, Flavobacterium indicum GPTSA100-9's aerobic nature and motility through flagella suggest its potential involvement in aquatic microbial communities, where it may serve as a decomposer, influencing the dynamics of organic material breakdown and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium indicum
StrainGPTSA100-9 = DSM 17447

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium indicum GPTSA100-9 = DSM 17447
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium indicum GPTSA100-9 = DSM 17447 chromosome I,

Gene Summary

Adenine Count

1020507 bp

Thymine Count

1033243 bp

Guanine Count

471286 bp

Cytosine Count

468053 bp

Genome Length

2993089 bp

Protein-coding Genes

2712 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinKQS_RS13910Not AvailablePositive283182 - 28411135373.0
16s rrna (cytidine(1402)-2'-o)-methyltransferaseKQS_RS01250Not AvailablePositive284156 - 28482724721.2
hypothetical proteinKQS_RS01255Not AvailablePositive284860 - 28532118234.3
hopj type iii effector proteinKQS_RS01260Not AvailablePositive285311 - 28562212038.0
single-stranded-dna-specific exonuclease recjKQS_RS01265Not AvailablePositive285777 - 28746563097.4
mfs transporterKQS_RS01270Not AvailablePositive287529 - 28878545419.1
udp-2,3-diacylglucosamine diphosphataseKQS_RS01275Not AvailableNegative288927 - 28966729041.8
choice-of-anchor l domain-containing proteinKQS_RS01280Not AvailablePositive289831 - 295521200081.0
type ix secretion system membrane protein porp/sprfKQS_RS01285Not AvailablePositive295590 - 29651034368.9
ompa family proteinKQS_RS01290Not AvailablePositive296532 - 29839769008.3

Displaying genes 251 – 260 of 2782 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.