Novosphingobium pentaromativorans US6-1

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium pentaromativorans US6-1 is a Gram-negative, facultative anaerobic bacterium characterized by its rod-shaped morphology. It is non-motile, despite the presence of true flagella, which is an interesting trait given its lack of mobility. The bacterium thrives optimally at a temperature of 29°C, categorizing it as mesophilic, with a temperature range that allows it to exist in various environmental conditions. In terms of genetic makeup, Novosphingobium pentaromativorans US6-1 has a complex genomic structure with nine replicons, which may contribute to its adaptability and metabolic versatility. The strain has several associated accessions, including AGFM00000000.1, NZ_AGFM01000122.1, and CP009291.1, among others, which provide a framework for genetic and functional studies. The ecological significance of Novosphingobium pentaromativorans US6-1 lies in its potential role in bioremediation processes, particularly in environments contaminated with aromatic compounds. Its ability to thrive under varying oxygen conditions and temperatures suggests that it may play a role in degrading pollutants in diverse ecological niches. Understanding its metabolic pathways and environmental interactions could lead to innovative strategies for managing contaminated sites, thereby contributing to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium pentaromativorans
StrainUS6-1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium pentaromativorans US6-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium pentaromativorans US6-1 plasmid pLA2, whole genome

Gene Summary

Adenine Count

11932 bp

Thymine Count

11993 bp

Guanine Count

18255 bp

Cytosine Count

17905 bp

Genome Length

60085 bp

Protein-coding Genes

82 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
globinNSU_0902Not AvailableNegative902176 - 90262816437.6
badm/rrf2 family transcriptional regulatorNSU_0903Not AvailablePositive902720 - 90314815160.4
hypothetical proteinNSU_0904Not AvailablePositive903203 - 9033676377.41
peptidyl-dipeptidase dcpNSU_0905Not AvailablePositive903441 - 9036447142.58
iron complex transport system atp-binding proteinNSU_0906Not AvailableNegative903675 - 90444527553.4
iron complex transport system permease proteinNSU_0907Not AvailableNegative904442 - 90540732807.6
iron complex transport system substrate-binding proteinNSU_0908Not AvailableNegative905404 - 90635432975.0
tonb-dependent receptorNSU_0909Not AvailableNegative906351 - 90826768116.9
hypothetical proteinNSU_0910Not AvailablePositive908301 - 90869914184.2
cell wall hydrolase, slebNSU_0911Not AvailablePositive908754 - 90996243003.3

Displaying genes 1071 – 1080 of 10275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.