Novosphingobium pentaromativorans US6-1

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium pentaromativorans US6-1 is a Gram-negative, facultative anaerobic bacterium characterized by its rod-shaped morphology. It is non-motile, despite the presence of true flagella, which is an interesting trait given its lack of mobility. The bacterium thrives optimally at a temperature of 29°C, categorizing it as mesophilic, with a temperature range that allows it to exist in various environmental conditions. In terms of genetic makeup, Novosphingobium pentaromativorans US6-1 has a complex genomic structure with nine replicons, which may contribute to its adaptability and metabolic versatility. The strain has several associated accessions, including AGFM00000000.1, NZ_AGFM01000122.1, and CP009291.1, among others, which provide a framework for genetic and functional studies. The ecological significance of Novosphingobium pentaromativorans US6-1 lies in its potential role in bioremediation processes, particularly in environments contaminated with aromatic compounds. Its ability to thrive under varying oxygen conditions and temperatures suggests that it may play a role in degrading pollutants in diverse ecological niches. Understanding its metabolic pathways and environmental interactions could lead to innovative strategies for managing contaminated sites, thereby contributing to environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium pentaromativorans
StrainUS6-1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium pentaromativorans US6-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

146851 bp

Thymine Count

144945 bp

Guanine Count

230606 bp

Cytosine Count

234426 bp

Genome Length

756828 bp

Protein-coding Genes

558 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

9

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNSU_RS24785Not AvailableNegative543 - 86310976.6
thermonuclease family proteinNSU_RS24790Not AvailableNegative980 - 157022051.3
toprim domain-containing proteinNSU_RS24795Not AvailableNegative1564 - 243932095.7
hypothetical proteinNSU_RS24800Not AvailableNegative2557 - 333929513.6
hypothetical proteinNSU_RS26855Not AvailableNegative3642 - 37945727.94
hypothetical proteinNSU_RS24810Not AvailablePositive4050 - 435811915.2
lytic transglycosylase domain-containing proteinNSU_RS24815Not AvailablePositive4756 - 542123252.5
trbc/virb2 family proteinNSU_RS24820Not AvailablePositive5443 - 578412135.5
type iv secretion system protein virb3NSU_RS24825Not AvailablePositive5791 - 613512305.2
virb4 family type iv secretion/conjugal transfer atpaseNSU_RS24830Not AvailablePositive6122 - 850689883.6

Displaying genes 1 – 10 of 10275 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.