Gordonia polyisoprenivorans NBRC 16320 = JCM 10675

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans NBRC 16320, also known as JCM 10675, is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant for its ecological interactions and potential applications in bioremediation. The organism possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptability in its environment. The genomic information for Gordonia polyisoprenivorans is accessible under the accession number BAEI00000000.1, providing a foundation for further genomic studies and comparative analyses with related species. The presence of only one replicon could suggest a reduced complexity in its genetic management, potentially allowing for rapid evolutionary responses to environmental pressures. From a biological and ecological perspective, the characteristics of Gordonia polyisoprenivorans, particularly its motility and genomic configuration, may enable it to thrive in diverse habitats, including those contaminated with polyisoprene and other organic compounds. This adaptability could make it a valuable organism for biotechnological applications, particularly in the degradation of synthetic polymers and the restoration of polluted environments. The insights gained from studying its genome and physiology could contribute to the development of more effective bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
StrainNBRC 16320 = JCM 10675

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans NBRC 16320 = JCM 10675 DNA, contig:

Gene Summary

Adenine Count

1041005 bp

Thymine Count

1041217 bp

Guanine Count

2110037 bp

Cytosine Count

2093219 bp

Genome Length

6285478 bp

Protein-coding Genes

5635 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
p-cumate dioxygenase large subunitGOPIP_094_00950Not AvailableNegative6126957 - 612828249566.3
p-cumate dioxygenase ferredoxin subunitGOPIP_094_00960Not AvailablePositive6128500 - 612882612132.1
p-cumate dioxygenase ferredoxin reductase subunitGOPIP_094_00970Not AvailablePositive6128886 - 613009441846.9
2,3-dihydroxy-p-cumate dioxygenaseGOPIP_094_00980Not AvailablePositive6130135 - 613120239225.9
putative iclr family transcriptional regulatorGOPIP_094_00990Not AvailableNegative6131219 - 613202528639.6
2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylaseGOPIP_094_01000Not AvailablePositive6132214 - 613328137660.8
putative baeyer-villiger monooxygenaseGOPIP_094_01010Not AvailablePositive6133278 - 613445341677.6
putative meta-cleavage compound hydrolaseGOPIP_094_01020Not AvailablePositive6134577 - 613541030617.4
putative fatty-acid--coa ligaseGOPIP_094_01030Not AvailableNegative6135503 - 613715260050.4
putative oxidoreductaseGOPIP_094_01040Not AvailableNegative6137325 - 613811026691.3

Displaying genes 5521 – 5530 of 5688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.