Gordonia polyisoprenivorans NBRC 16320 = JCM 10675

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia polyisoprenivorans NBRC 16320, also known as JCM 10675, is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant for its ecological interactions and potential applications in bioremediation. The organism possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptability in its environment. The genomic information for Gordonia polyisoprenivorans is accessible under the accession number BAEI00000000.1, providing a foundation for further genomic studies and comparative analyses with related species. The presence of only one replicon could suggest a reduced complexity in its genetic management, potentially allowing for rapid evolutionary responses to environmental pressures. From a biological and ecological perspective, the characteristics of Gordonia polyisoprenivorans, particularly its motility and genomic configuration, may enable it to thrive in diverse habitats, including those contaminated with polyisoprene and other organic compounds. This adaptability could make it a valuable organism for biotechnological applications, particularly in the degradation of synthetic polymers and the restoration of polluted environments. The insights gained from studying its genome and physiology could contribute to the development of more effective bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia polyisoprenivorans
StrainNBRC 16320 = JCM 10675

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia polyisoprenivorans NBRC 16320 = JCM 10675 DNA, contig:

Gene Summary

Adenine Count

1041005 bp

Thymine Count

1041217 bp

Guanine Count

2110037 bp

Cytosine Count

2093219 bp

Genome Length

6285478 bp

Protein-coding Genes

5635 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
20s proteasome beta-type subunitGOPIP_054_00930Not AvailablePositive2932824 - 293369330576.0
20s proteasome alpha-type subunitGOPIP_054_00940Not AvailablePositive2933690 - 293450528712.6
proteasome accessory factor aGOPIP_054_00950Not AvailablePositive2934605 - 293594850277.9
proteasome accessory factor bGOPIP_054_00960Not AvailablePositive2935965 - 293696335383.9
proteasome accessory factor cGOPIP_054_00970Not AvailablePositive2936963 - 293797036273.0
sec-independent protein translocase protein tata/e homologGOPIP_054_00980Not AvailablePositive2938061 - 29383339752.69
sec-independent protein translocase protein tatcGOPIP_054_00990Not AvailablePositive2938345 - 293934036373.9
putative helicaseGOPIP_054_01000Not AvailablePositive2939420 - 2942272103026.0
hypothetical proteinGOPIP_054_01010Not AvailablePositive2942504 - 294355935549.9
putative 5'-3' exonucleaseGOPIP_054_01020Not AvailableNegative2943599 - 294469038127.9

Displaying genes 2671 – 2680 of 5688 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.