Rhodococcoides fascians D188

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians D188 is a Gram-positive bacterium characterized by its cocci shape. This species is notable for having three replicons, which suggests a complex genomic structure that may confer advantages in adaptability and diversity. The genome of R. fascians D188 has been sequenced, with accessions available under NZ_CP015237.1, NZ_CP015236.1, and NZ_CP015235.1. The presence of multiple replicons could indicate a potential for horizontal gene transfer or the capacity to maintain various genetic elements that may enhance survival in diverse environments. This trait could be particularly relevant for understanding the ecological roles of R. fascians D188, especially in soil or plant-associated habitats where such bacteria often thrive. While specific ecological insights about R. fascians D188 remain limited, its Gram-positive nature and cocci morphology suggest that it may be involved in interactions with plant systems or soil microbiomes. Overall, the genomic complexity and morphological characteristics of Rhodococcoides fascians D188 highlight the potential for this organism to play a significant role in microbial ecology and possibly in biotechnological applications related to plant health or soil fertility.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
StrainD188

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians D188 plasmid pFiD188, complete sequence.

Gene Summary

Adenine Count

37807 bp

Thymine Count

37538 bp

Guanine Count

61529 bp

Cytosine Count

60523 bp

Genome Length

197397 bp

Protein-coding Genes

173 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dha2 family efflux mfs transporter permease subunitA3L23_RS00005Not AvailablePositive97 - 79026620.9
tigr02569 family proteinA3L23_RS00010Not AvailableNegative780 - 163430735.4
adenylyltransferase/sulfurtransferase moezA3L23_RS00015Not AvailableNegative1703 - 286941507.9
duf3152 domain-containing proteinA3L23_RS00020Not AvailableNegative2946 - 397437115.1
tetr/acrr family transcriptional regulatorA3L23_RS00025Not AvailablePositive4311 - 496423834.1
duf3107 domain-containing proteinA3L23_RS00030Not AvailableNegative5048 - 52757956.44
ferritin-like fold-containing proteinA3L23_RS00035Not AvailableNegative5413 - 614426283.8
dead/deah box helicaseA3L23_RS00040Not AvailablePositive6558 - 811455345.5
hypothetical proteinA3L23_RS00045Not AvailablePositive8124 - 937742718.7
para family proteinA3L23_RS00050Not AvailableNegative9415 - 1020927905.6

Displaying genes 1 – 10 of 5184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.