Flavobacterium branchiophilum FL-15

RodNon-motile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium branchiophilum FL-15 is a rod-shaped, non-motile bacterium classified as a chemoheterotroph, indicating that it derives its energy from organic compounds. This species is known to inhabit multiple environments, although specific habitat details are not provided. Notably, it is associated with the host Silurus glanis, suggesting a potential ecological role in relation to this fish species. The bacterium possesses two replicons, which may indicate a complex genomic organization that could be relevant to its adaptability and function within its ecological niche. Additionally, Flavobacterium branchiophilum FL-15 does not form spores, a trait that may influence its survival strategies in varying environmental conditions. The presence of flagella suggests that while the bacterium is non-motile, it may possess structures that could facilitate interactions with its environment or host. The accessions NC_016001.1 and NC_018751.1 provide pathways for further genetic and genomic study. In summary, Flavobacterium branchiophilum FL-15 exhibits characteristics that align with its role as a chemoheterotrophic bacterium in aquatic ecosystems, particularly in association with Silurus glanis. Its non-motile nature, coupled with its genomic features, may provide insights into its interactions within its habitat and with its host, contributing to the understanding of microbial dynamics in freshwater environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium branchiophilum
StrainFL-15

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium branchiophilum FL-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMultiple
Biotic relationshipNot Available
Host(s)Silurus glanis
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Flavobacterium branchiophilum FL-15


Gene Summary

Adenine Count

1089 bp

Thymine Count

1178 bp

Guanine Count

568 bp

Cytosine Count

573 bp

Genome Length

3408 bp

Protein-coding Genes

5 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemaseFBFL15_RS00195Not AvailablePositive44030 - 4646891697.5
uma2 family endonucleaseFBFL15_RS00200Not AvailablePositive46533 - 4712022515.0
uma2 family endonucleaseFBFL15_RS00205Not AvailablePositive47131 - 4771822434.9
uma2 family endonucleaseFBFL15_RS00210Not AvailablePositive47730 - 4831722339.8
hypothetical proteinFBFL15_RS00215Not AvailableNegative48305 - 4889823946.2
atp-binding proteinFBFL15_RS00220Not AvailableNegative48902 - 5025152628.8
crossover junction endodeoxyribonuclease ruvcFBFL15_RS00225Not AvailableNegative50426 - 5098020644.3
hypothetical proteinFBFL15_RS00230Not AvailablePositive51060 - 5198635221.4
coa transferase subunit bFBFL15_RS00235Not AvailableNegative52163 - 5281623094.4
coa transferase subunit aFBFL15_RS00240Not AvailableNegative52847 - 5354525186.6

Displaying genes 41 – 50 of 3060 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014074LevanC18H32O16Chemical structure of Levan9013-95-0
Average504.4371Da
Monoisotopic504.169034976Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.