Escherichia coli PCN033

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli PCN033 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic lifestyle, allowing it to thrive in environments with or without oxygen. This organism is typically found in host-associated habitats, indicating its role in the microbiota of various hosts. E. coli PCN033 can exist in pairs or singles, showcasing a versatile cell arrangement that may facilitate its adaptation to different ecological niches. This strain is motile, possessing flagella that enable movement, which can be crucial for colonization and interaction with the host environment. The optimal growth temperature for E. coli PCN033 is 37°C, which aligns with the body temperature of many mammals, further emphasizing its association with host organisms. It falls within the mesophilic temperature range, indicating it thrives in moderate temperature environments. E. coli PCN033 possesses four replicons and has a double-membrane structure, characteristic of Gram-negative bacteria. The presence of multiple replicons may suggest a complex genetic landscape that could contribute to its adaptability and resilience in diverse environments. As a free-living organism, E. coli PCN033 plays a significant role in the microbial ecosystem, potentially contributing to nutrient cycling and influencing the health of its host. Its adaptability to various oxygen levels and its motility highlight its ecological versatility, which is essential for its survival and function in host-associated habitats. The accessions associated with this strain (NZ_CP006632.1; NZ_CP006633.1; NZ_CP006634.1; NZ_CP006635.1) provide resources for further genomic studies that may elucidate its biological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainPCN033

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli PCN033
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli PCN033 plasmid p1PCN033, complete sequence.

Gene Summary

Adenine Count

1085 bp

Thymine Count

796 bp

Guanine Count

694 bp

Cytosine Count

744 bp

Genome Length

3319 bp

Protein-coding Genes

5 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Gp70PPECC33_RS04645P0AAZ6Positive996229 - 99757249628.8
serine--trna ligasePPECC33_RS04650A7ZJW2Positive997663 - 99895548416.8
AttlNot AvailableNot AvailablePositive998161 - 998173Not Available
Hok/gef family proteinPPECC33_RS04655Not AvailableNegative999261 - 9994015254.64
Ogr/delta-like zinc finger family proteinPPECC33_RS04665Not AvailableNegative999593 - 9998539692.39
Bacteriop2 gpd proteinPPECC33_RS04670P21679Negative999896 - 100100541107.8
Tail sheath family proteinPPECC33_RS04675P85993Positive1001163 - 100234743489.5
Major tail tube proteinPPECC33_RS04680P85988Positive1002347 - 100285918795.4
Tail e family proteinPPECC33_RS04685Not AvailablePositive1002915 - 100328913466.1
Gpe family tail proteinPPECC33_RS04690Not AvailablePositive1003298 - 10034535743.69

Displaying genes 1 – 10 of 5020 in total

Metabolites

17 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm00026073-methyl-(2E)-butenoyl-CoAC26H38N7O17P3SChemical structure of 3-methyl-(2E)-butenoyl-CoANot available
Average845.61Da
Monoisotopic845.1279693Da
BASm0002629(3S)-3-aminobutanoyl-CoAC25H40N8O17P3SChemical structure of (3S)-3-aminobutanoyl-CoANot available
Average849.62Da
Monoisotopic849.1461448Da
BASm0002650pentanoyl-CoAC26H40N7O17P3SChemical structure of pentanoyl-CoANot available
Average847.62Da
Monoisotopic847.143619344Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da

Displaying 1–10 of 17 metabolites

Health Effects

No health effects information available for this bacterium.