Rhodococcus sp. p52

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. p52
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. p52 chromosome, complete genome.

Gene Summary

Adenine Count

778608 bp

Thymine Count

781776 bp

Guanine Count

1667289 bp

Cytosine Count

1665674 bp

Genome Length

4893347 bp

Protein-coding Genes

4512 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa synthetaseIM25_RS21595Not AvailablePositive4648377 - 465008061014.1
Trna-metNot AvailableNot AvailablePositive4650131 - 4650207Not Available
transglycosylase family proteinIM25_RS21605Not AvailablePositive4650673 - 465119717704.3
upf0182 family proteinIM25_RS21610C1B1K2Negative4651293 - 4654307110062.0
ppa1309 family proteinIM25_RS21615Not AvailablePositive4654500 - 465510521527.0
pdz domain-containing proteinIM25_RS21620O34470Negative4655169 - 465619435258.7
zinc-dependent metalloproteaseIM25_RS21625Not AvailablePositive4656310 - 465775550820.7
hypothetical proteinIM25_RS21630Not AvailablePositive4657841 - 465873131650.0
aarf/abc1/ubib kinase family proteinIM25_RS21635A3QJU3Positive4658728 - 466005348345.8
whib family transcriptional regulatorIM25_RS21640A0QTT1Negative4660073 - 466039912233.5

Displaying genes 4451 – 4460 of 5138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

408 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da

Displaying 1–10 of 408 metabolites

Health Effects

No health effects information available for this bacterium.