Rhodococcus sp. p52

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. p52
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. p52 chromosome, complete genome.

Gene Summary

Adenine Count

778608 bp

Thymine Count

781776 bp

Guanine Count

1667289 bp

Cytosine Count

1665674 bp

Genome Length

4893347 bp

Protein-coding Genes

4512 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gaf and antar domain-containing proteinIM25_RS06965Not AvailablePositive1510544 - 151127526046.8
succinic semialdehyde dehydrogenaseIM25_RS06970A0R4Q0Positive1511341 - 151289455682.2
alpha/beta hydrolase family proteinIM25_RS06980P35866Positive1513321 - 151464046858.1
bifunctional lysylphosphatidylglycerol flippase/synthetase mprfIM25_RS06985P35867Positive1514607 - 151714791193.6
dha2 family efflux mfs transporter permease subunitIM25_RS06990P9WG86Negative1517155 - 151857649218.4
duf427 domain-containing proteinIM25_RS06995Not AvailableNegative1518573 - 151934629794.5
hypothetical proteinIM25_RS27360Not AvailablePositive1519524 - 15196554953.8
phytoene desaturase family proteinIM25_RS07000Not AvailablePositive1519652 - 152127156968.8
phytoene/squalene synthase family proteinIM25_RS07005Not AvailablePositive1521264 - 152223236677.2
isopentenyl-diphosphate delta-isomeraseIM25_RS07010A4FK76Positive1522285 - 152286921705.6

Displaying genes 1521 – 1530 of 5138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

408 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da

Displaying 1–10 of 408 metabolites

Health Effects

No health effects information available for this bacterium.