Emticicia oligotrophica DSM 17448

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Leadbetterellaceae

Genus

Emticicia

Description

Emticicia oligotrophica DSM 17448 is a Gram-negative, non-spore-forming bacterium characterized by its rod-shaped morphology and aerobic metabolic requirements. This organism thrives optimally at a temperature of 37.0°C, suggesting it is well-adapted to moderate thermal environments, which is a common trait among many mesophilic bacteria. As a member of the microbial community, Emticicia oligotrophica may play a significant role in nutrient cycling within its ecological niche, particularly in oligotrophic environments where nutrient availability is limited. Its aerobic nature implies that it relies on oxygen for its metabolic processes, which could influence its interactions with other microorganisms and its role in biogeochemical cycles. Further studies could elucidate the specific contributions of Emticicia oligotrophica to its environment, particularly regarding its potential for biodegradation or nutrient assimilation within low-nutrient ecosystems. Understanding its metabolic pathways and ecological interactions may provide insights into the adaptability and resilience of microbial communities facing nutrient scarcity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyLeadbetterellaceae
GenusEmticicia
SpeciesEmticicia oligotrophica
StrainDSM 17448

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Emticicia oligotrophica DSM 17448 plasmid pEMTOL04, complete

Gene Summary

Adenine Count

12964 bp

Thymine Count

12494 bp

Guanine Count

6566 bp

Cytosine Count

6552 bp

Genome Length

38576 bp

Protein-coding Genes

28 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3592 domain-containing proteinEMTOL_RS21445Not AvailablePositive1390 - 183317184.1
3-coathanger stack domain-containing proteinEMTOL_RS21450Not AvailablePositive2106 - 6317157442.0
llm class flavin-dependent oxidoreductaseEMTOL_RS21455Not AvailablePositive6489 - 766444145.2
slc5 family proteinEMTOL_RS21460Not AvailablePositive7767 - 956367074.9
glycosyl hydrolase family 95 catalytic domain-containing proteinEMTOL_RS21465Not AvailablePositive9811 - 1241798416.0
replication initiation proteinEMTOL_RS21470Not AvailableNegative12611 - 1412259051.2
para family proteinEMTOL_RS21475Not AvailablePositive15098 - 1603934553.3
hypothetical proteinEMTOL_RS21480Not AvailablePositive16048 - 1694434254.3
atp-binding proteinEMTOL_RS21490Not AvailableNegative17170 - 1833644134.7
luxr c-terminal-related transcriptional regulatorEMTOL_RS21495Not AvailableNegative19091 - 1972924283.8

Displaying genes 1 – 10 of 4339 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.