Bifidobacterium bifidum S17

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum S17 is a microorganism that exhibits the following characteristics: mesophile, chemoheterotroph, anaerobic energy production, Gram-variable, rod-shaped, found in the gastrointestinal tract of humans, obligate anaerobe. As a mesophile, Bifidobacterium bifidum S17 thrives in temperatures ranging from 25°C to 45°C, making it well-suited to inhabit the human gastrointestinal tract. Its chemoheterotrophic metabolism means that it obtains energy by breaking down organic compounds, rather than producing its own food through photosynthesis. This microbe relies on anaerobic energy production, suggesting that it is adapted to environments with low oxygen levels. Gram-variable staining indicates that Bifidobacterium bifidum S17 has an irregular or uncertain cell wall structure, which can affect its interaction with the human immune system. In terms of shape, this microbe is rod-shaped, which can facilitate its movement and competition for nutrients within the gastrointestinal tract. Its abundance in the human gastrointestinal tract, particularly in infants, plays a crucial role in the development of the gut microbiome. As an obligate anaerobe, Bifidobacterium bifidum S17 requires an environment with no oxygen present to survive and replicate. This is likely due to the presence of oxygen-sensitive enzymes and its reliance on anaerobic energy production. Moreover, Bifidobacterium bifidum S17 has been increasingly recognized for its potential health benefits, including the production of short-chain fatty acids, modulation of the immune system, and improvement of nutrient absorption in the gut. The strain S17 has been extensively studied due to its ability to produce bifidin, a polysaccharide with prebiotic properties, which can promote the growth of beneficial microorganisms in the gut. Overall, Bifidobacterium bifidum S17 is a significant component of the human microbiome, and its unique characteristics have sparked significant interest in its potential applications in human health and disease.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainS17

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum S17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Bifidobacterium bifidum S17


Gene Summary

Adenine Count

406900 bp

Thymine Count

407529 bp

Guanine Count

686228 bp

Cytosine Count

686225 bp

Genome Length

2186882 bp

Protein-coding Genes

1768 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive90873 - 90884Not Available
Helix-turn-helix dna binding domain proteinBBIF_RS00445Not AvailablePositive98215 - 9901529528.7
Hnh endonucleaseBBIF_RS00450Not AvailablePositive99099 - 9944012862.2
hypothetical proteinBBIF_RS00455Not AvailablePositive99561 - 9995613970.6
TerminaseBBIF_RS00460Not AvailablePositive99916 - 10136752921.3
Portal proteinBBIF_RS00465Not AvailablePositive101364 - 10283953837.6
Muf-like minor capsid proteinBBIF_RS00470Not AvailablePositive102766 - 10394445253.4
hypothetical proteinBBIF_RS00475Not AvailablePositive103902 - 1041479020.46
Trna-tyr;Not AvailableNot AvailablePositive104210 - 104294Not Available
Gp7BBIF_RS00485Not AvailablePositive104357 - 10495021197.9

Displaying genes 1 – 10 of 1844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

302 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da

Displaying 1–10 of 302 metabolites

Health Effects

No health effects information available for this bacterium.