Trinickia symbiotica str. JPY 581

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Trinickia

Description

Trinickia symbiotica strain JPY 581 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 37.0°C. This strain is characterized by its non-spore-forming nature, indicating that it does not produce spores as a means of reproduction or survival under unfavorable conditions. The aerobic requirement suggests that T. symbiotica str. JPY 581 relies on oxygen for its metabolic processes, which may influence its habitat preferences and interactions within its ecosystem. Given its optimal growth temperature, this bacterium may be well-suited for environments that mimic mammalian body temperatures, potentially indicating a symbiotic relationship with host organisms. The rod shape of T. symbiotica str. JPY 581 may facilitate motility and nutrient absorption in its habitat, contributing to its ecological versatility. Further studies could elucidate the specific ecological roles this microbe plays, especially in relation to its potential interactions with other microorganisms or host organisms in its environment. Understanding these dynamics may provide insights into microbial community structures and functions, particularly in ecosystems where aerobic bacteria are prevalent.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusTrinickia
SpeciesTrinickia symbiotica
StrainJPY 581

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Mimosa, Mimosa pudica
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Trinickia symbiotica strain JPY 581

Gene Summary

Adenine Count

1255808 bp

Thymine Count

1244600 bp

Guanine Count

2116232 bp

Cytosine Count

2135466 bp

Genome Length

6752106 bp

Protein-coding Genes

5983 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
emra/emrk family multidrug efflux transporter periplasmic adaptor subunitC0Z20_05090Not AvailablePositive1108845 - 111009244445.1
emrb/qaca family drug resistance transporterC0Z20_05095Not AvailablePositive1110089 - 111164554750.6
choline dehydrogenaseC0Z20_05100Not AvailablePositive1111834 - 111282034433.5
transcriptional regulator betiC0Z20_05105Not AvailablePositive1112948 - 111355022330.4
betaine-aldehyde dehydrogenaseC0Z20_05110Not AvailablePositive1113600 - 111506952896.5
choline dehydrogenaseC0Z20_05115Not AvailablePositive1115170 - 111687662410.1
choline abc transporter substrate-binding proteinC0Z20_05120Not AvailablePositive1116976 - 111792634368.4
hypothetical proteinC0Z20_05125Not AvailableNegative1118046 - 11182406958.55
duf4142 domain-containing proteinC0Z20_05130Not AvailableNegative1118327 - 111882717949.3
mandelate racemase/muconate lactonizing enzyme family proteinC0Z20_05135Not AvailableNegative1118997 - 112018743451.0

Displaying genes 1001 – 1010 of 6041 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.