Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | RUNSL_RS04340 | Not Available | Negative | 1031173 - 1032678 | 56732.0 |
| tonb-dependent receptor | RUNSL_RS04345 | Not Available | Negative | 1032708 - 1036139 | 125836.0 |
| fecr family protein | RUNSL_RS04350 | Not Available | Negative | 1036396 - 1037472 | 40496.3 |
| rna polymerase sigma factor | RUNSL_RS04355 | Not Available | Negative | 1037528 - 1038118 | 23249.5 |
| ecsc family protein | RUNSL_RS04360 | Not Available | Positive | 1038483 - 1039223 | 28258.4 |
| hypothetical protein | RUNSL_RS04365 | Not Available | Negative | 1039253 - 1039756 | 19367.3 |
| hypothetical protein | RUNSL_RS04370 | Not Available | Positive | 1039920 - 1040954 | 39555.8 |
| hypothetical protein | RUNSL_RS30640 | Not Available | Negative | 1041034 - 1041531 | 17401.7 |
| hydroxypyruvate isomerase family protein | RUNSL_RS04380 | Not Available | Negative | 1042018 - 1042905 | 32441.2 |
| fad-dependent oxidoreductase | RUNSL_RS04385 | Not Available | Negative | 1043231 - 1044946 | 64258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.