Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
27853 bp
Thymine Count
29646 bp
Guanine Count
24615 bp
Cytosine Count
24885 bp
Genome Length
106999 bp
Protein-coding Genes
79 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | RUNSL_RS29070 | Not Available | Positive | 140 - 1321 | 45641.1 |
| family 1 glycosylhydrolase | RUNSL_RS29075 | Not Available | Positive | 1373 - 3550 | 82497.0 |
| ferritin-like domain-containing protein | RUNSL_RS29080 | Not Available | Negative | 3665 - 4189 | 18839.1 |
| sugar phosphate isomerase/epimerase | RUNSL_RS29085 | Not Available | Positive | 4459 - 5229 | 28492.1 |
| lipocalin family protein | RUNSL_RS29090 | Not Available | Positive | 5307 - 5846 | 20465.5 |
| duf1080 domain-containing protein | RUNSL_RS29095 | Not Available | Negative | 5984 - 6844 | 32188.4 |
| c-type cytochrome | RUNSL_RS29100 | Not Available | Negative | 6929 - 9571 | 95922.7 |
| sgnh/gdsl hydrolase family protein | RUNSL_RS29105 | Not Available | Negative | 9718 - 10542 | 31647.0 |
| coce/nond family hydrolase | RUNSL_RS29110 | Not Available | Negative | 10557 - 12581 | 76807.3 |
| tyrosine-type recombinase/integrase | RUNSL_RS29115 | Not Available | Negative | 12637 - 13833 | 44999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.