Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | RUNSL_RS03295 | Not Available | Negative | 783835 - 784296 | 17690.4 |
| zinc-dependent metalloprotease | RUNSL_RS03300 | Not Available | Negative | 784382 - 786955 | 96466.4 |
| ornithine--oxo-acid transaminase | RUNSL_RS03305 | Not Available | Positive | 787177 - 788412 | 45240.3 |
| dash family cryptochrome | RUNSL_RS03310 | Not Available | Negative | 788482 - 789921 | 55892.6 |
| voc family protein | RUNSL_RS03315 | Not Available | Positive | 790196 - 790585 | 14736.6 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | RUNSL_RS03320 | Not Available | Positive | 790620 - 791219 | 22807.5 |
| 1-phosphofructokinase family hexose kinase | RUNSL_RS03325 | Not Available | Positive | 791198 - 792145 | 33830.7 |
| 4fe-4s binding protein | RUNSL_RS03330 | Not Available | Positive | 792183 - 793613 | 51834.8 |
| hypothetical protein | RUNSL_RS29295 | Not Available | Negative | 793614 - 794120 | 17804.5 |
| rna methyltransferase | RUNSL_RS03340 | Not Available | Negative | 794214 - 794756 | 19975.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.