Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | RUNSL_RS03045 | Not Available | Negative | 726923 - 727348 | 15215.4 |
| ygcg family protein | RUNSL_RS03050 | Not Available | Negative | 727489 - 728256 | 27444.7 |
| tpm domain-containing protein | RUNSL_RS03055 | Not Available | Negative | 728333 - 728767 | 16277.1 |
| lema family protein | RUNSL_RS03060 | Not Available | Negative | 728840 - 729421 | 21148.0 |
| gh3 auxin-responsive promoter family protein | RUNSL_RS03065 | Not Available | Negative | 729717 - 731213 | 57664.7 |
| glycerophosphodiester phosphodiesterase | RUNSL_RS03070 | Not Available | Negative | 731336 - 732181 | 32327.8 |
| 2-isopropylmalate synthase | RUNSL_RS03075 | Not Available | Positive | 732605 - 733759 | 42124.6 |
| gmc family oxidoreductase | RUNSL_RS03080 | Not Available | Negative | 733875 - 735518 | 59746.8 |
| hypothetical protein | RUNSL_RS03085 | Not Available | Negative | 735648 - 736319 | 24915.1 |
| hypothetical protein | RUNSL_RS03090 | Not Available | Negative | 736341 - 737003 | 25079.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.