Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | RUNSL_RS31215 | Not Available | Positive | 634422 - 635426 | 38024.2 |
| pvc-type heme-binding cxxch protein | RUNSL_RS02685 | Not Available | Negative | 635519 - 638923 | 124773.0 |
| heparinase ii/iii family protein | RUNSL_RS02690 | Not Available | Positive | 639561 - 641492 | 72610.6 |
| pqq-dependent sugar dehydrogenase | RUNSL_RS02695 | Not Available | Positive | 641732 - 644914 | 117512.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | RUNSL_RS02700 | Not Available | Negative | 645044 - 646333 | 46279.0 |
| abc transporter substrate-binding protein | RUNSL_RS02705 | Not Available | Negative | 646367 - 648052 | 64062.4 |
| phospho-sugar mutase | RUNSL_RS02710 | Not Available | Negative | 648314 - 650062 | 64261.3 |
| cupin-like domain-containing protein | RUNSL_RS02715 | Not Available | Positive | 650482 - 651321 | 32528.2 |
| gyri-like domain-containing protein | RUNSL_RS02720 | Not Available | Negative | 651473 - 651925 | 17665.3 |
| voc family protein | RUNSL_RS02725 | Not Available | Negative | 651937 - 652365 | 15819.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.