Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc oxidoreductase | RUNSL_RS02575 | Not Available | Negative | 612290 - 614005 | 63761.5 |
| gluconate 2-dehydrogenase subunit 3 family protein | RUNSL_RS02580 | Not Available | Negative | 614086 - 614643 | 20456.1 |
| duf3237 domain-containing protein | RUNSL_RS02585 | Not Available | Negative | 614806 - 615255 | 16758.4 |
| flavin-dependent oxidoreductase | RUNSL_RS02590 | Not Available | Negative | 615332 - 616567 | 46155.2 |
| multidrug effflux mfs transporter | RUNSL_RS02595 | Not Available | Negative | 616748 - 617941 | 42523.3 |
| 3-oxoadipyl-coa thiolase | RUNSL_RS02600 | Not Available | Negative | 618064 - 619272 | 42742.6 |
| atp-binding protein | RUNSL_RS02605 | Not Available | Negative | 619269 - 620399 | 44635.8 |
| 3-oxoacid coa-transferase | RUNSL_RS30140 | Not Available | Negative | 620494 - 621840 | 46869.9 |
| hypothetical protein | RUNSL_RS02620 | Not Available | Positive | 621884 - 622123 | 9459.65 |
| hnh endonuclease | RUNSL_RS02625 | Not Available | Positive | 622159 - 622506 | 13005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
