Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | RUNSL_RS02335 | Not Available | Negative | 557588 - 558418 | 30560.9 |
| dabb family protein | RUNSL_RS02340 | Not Available | Negative | 558517 - 558810 | 11683.9 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | RUNSL_RS02345 | Not Available | Negative | 558958 - 561351 | 89274.4 |
| transposase | RUNSL_RS02350 | Not Available | Positive | 561482 - 562828 | 52674.6 |
| alpha/beta hydrolase | RUNSL_RS02355 | Not Available | Negative | 562962 - 563876 | 33562.6 |
| mfs transporter | RUNSL_RS02360 | Not Available | Negative | 564151 - 565371 | 43207.6 |
| esterase | RUNSL_RS02365 | Not Available | Negative | 565450 - 566589 | 42375.9 |
| uma2 family endonuclease | RUNSL_RS02370 | Not Available | Positive | 566827 - 567504 | 26051.1 |
| cyclase family protein | RUNSL_RS02375 | Not Available | Negative | 567552 - 568313 | 28317.9 |
| uma2 family endonuclease | RUNSL_RS02380 | Not Available | Positive | 568359 - 568985 | 24311.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.