Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo acid dehydrogenase subunit e2 | RUNSL_RS02145 | Not Available | Positive | 504792 - 505601 | 29947.6 |
| tonb-dependent receptor | RUNSL_RS02150 | Not Available | Positive | 506263 - 509418 | 116475.0 |
| ragb/susd family nutrient uptake outer membrane protein | RUNSL_RS02155 | Not Available | Positive | 509465 - 511240 | 67565.0 |
| hnh endonuclease family protein | RUNSL_RS02160 | Not Available | Negative | 511363 - 511764 | 15926.9 |
| hypothetical protein | RUNSL_RS02165 | Not Available | Positive | 511829 - 512035 | 8131.51 |
| hypothetical protein | RUNSL_RS02170 | Not Available | Positive | 512137 - 512760 | 23586.5 |
| duf262 domain-containing protein | RUNSL_RS02175 | Not Available | Negative | 512928 - 513305 | 14583.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | RUNSL_RS02180 | Not Available | Positive | 513463 - 514677 | 45215.9 |
| hypothetical protein | RUNSL_RS31885 | Not Available | Positive | 515272 - 515346 | 2724.24 |
| heparinase ii/iii family protein | RUNSL_RS31890 | Not Available | Positive | 515849 - 516604 | 27441.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.