Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseRUNSL_RS24210Not AvailablePositive5723705 - 572447827365.0
hypothetical proteinRUNSL_RS31095Not AvailablePositive5724529 - 572526929037.3
chrd domain-containing proteinRUNSL_RS24220Not AvailablePositive5725350 - 572582617458.7
aconitate hydrataseRUNSL_RS24225Not AvailableNegative5725969 - 572824281484.9
hypothetical proteinRUNSL_RS24230Not AvailableNegative5728445 - 572892117105.9
alkaline phosphatase family proteinRUNSL_RS24235Not AvailableNegative5729018 - 573026247253.0
polyphosphate kinase 1RUNSL_RS24240Not AvailableNegative5730259 - 573258090086.4
dna topoisomerase (atp-hydrolyzing) subunit bRUNSL_RS24245Not AvailableNegative5732914 - 573488473188.3
duf5107 domain-containing proteinRUNSL_RS24250Not AvailableNegative5735258 - 5738218112619.0
hypothetical proteinRUNSL_RS24255Not AvailablePositive5738311 - 573891923049.1

Displaying genes 4991 – 5000 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.