Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | RUNSL_RS01835 | Not Available | Negative | 422940 - 423329 | 15015.3 |
| m14 metallopeptidase family protein | RUNSL_RS01840 | Not Available | Negative | 424118 - 426883 | 101932.0 |
| hypothetical protein | RUNSL_RS01845 | Not Available | Positive | 427136 - 427405 | 10122.8 |
| hypothetical protein | RUNSL_RS01850 | Not Available | Negative | 427426 - 428304 | 34055.3 |
| atp-binding protein | RUNSL_RS01855 | Not Available | Negative | 428530 - 429894 | 52628.8 |
| m14 family zinc carboxypeptidase | RUNSL_RS01865 | Not Available | Negative | 430328 - 433114 | 103969.0 |
| s41 family peptidase | RUNSL_RS01870 | Not Available | Positive | 433368 - 436553 | 122613.0 |
| duf4494 domain-containing protein | RUNSL_RS01875 | Not Available | Positive | 436718 - 437230 | 19147.6 |
| toxin-antitoxin system ywqk family antitoxin | RUNSL_RS29275 | Not Available | Negative | 437281 - 438105 | 31649.6 |
| deoxyribose-phosphate aldolase | RUNSL_RS01885 | Not Available | Negative | 438211 - 438969 | 27208.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.