Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Runella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Runella |
| Species | Runella slithyformis |
| Strain | DSM 19594 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Runella slithyformis DSM 19594 plasmid pRUNSL05, complete
Gene Summary
Adenine Count
10807 bp
Thymine Count
10841 bp
Guanine Count
8473 bp
Cytosine Count
8663 bp
Genome Length
38784 bp
Protein-coding Genes
32 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | RUNSL_RS23065 | Not Available | Negative | 5433414 - 5434730 | 48161.0 |
| methionine adenosyltransferase | RUNSL_RS23070 | Not Available | Negative | 5435233 - 5436522 | 47071.1 |
| hypothetical protein | RUNSL_RS23075 | Not Available | Negative | 5436933 - 5438195 | 46969.1 |
| uma2 family endonuclease | RUNSL_RS23080 | Not Available | Negative | 5439055 - 5439657 | 23143.3 |
| sialidase family protein | RUNSL_RS23085 | Not Available | Positive | 5440219 - 5441601 | 51617.8 |
| s9 family peptidase | RUNSL_RS23090 | Not Available | Negative | 5442262 - 5444454 | 83018.5 |
| m48 family metalloprotease | RUNSL_RS23095 | Not Available | Negative | 5444481 - 5445266 | 28220.9 |
| transposase | RUNSL_RS23100 | Not Available | Negative | 5445410 - 5446649 | 43869.3 |
| type i dna topoisomerase | RUNSL_RS23105 | Not Available | Positive | 5446848 - 5449310 | 91964.1 |
| dienelactone hydrolase family protein | RUNSL_RS23110 | Not Available | Positive | 5449556 - 5450416 | 31424.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.