Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 113RUNSL_RS22755Not AvailableNegative5354115 - 535512238945.1
carboxypeptidase-like regulatory domain-containing proteinRUNSL_RS22760Not AvailableNegative5355127 - 535579525060.3
rna polymerase sigma factor rpod/sigaRUNSL_RS22765Not AvailableNegative5356052 - 535691532837.3
polyribonucleotide nucleotidyltransferaseRUNSL_RS22770Not AvailableNegative5357116 - 535934782079.4
30s ribosomal protein s15RUNSL_RS22775Not AvailableNegative5359577 - 535984610476.7
lptf/lptg family permeaseRUNSL_RS22780Not AvailableNegative5359910 - 536141557570.1
start-like domain-containing proteinRUNSL_RS22785Not AvailableNegative5361426 - 536181815200.7
Trna-metNot AvailableNot AvailablePositive5362041 - 5362114Not Available
t9ss type a sorting domain-containing proteinRUNSL_RS31775Not AvailablePositive5362240 - 536261414091.5
transposaseRUNSL_RS22800Not AvailableNegative5362640 - 536398652674.6

Displaying genes 4701 – 4710 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.