Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rep-associated tyrosine transposaseRUNSL_RS20725Not AvailableNegative4876978 - 487753221888.1
is3 family transposaseRUNSL_RS20730Not AvailablePositive4877715 - 487838025609.1
integrase core domain-containing proteinRUNSL_RS31520Not AvailablePositive4878316 - 487867813981.6
sulfite exporter taue/safe family proteinRUNSL_RS20740Not AvailableNegative4878731 - 487959130563.0
l-serine ammonia-lyase, iron-sulfur-dependent, subunit betaRUNSL_RS20745Not AvailablePositive4879864 - 488133052228.3
hypothetical proteinRUNSL_RS20750Not AvailablePositive4881392 - 488295158885.2
ceramidase domain-containing proteinRUNSL_RS20755Not AvailablePositive4882964 - 488380031707.6
vps10 domain-containing proteinRUNSL_RS20760Not AvailablePositive4883905 - 4887117117664.0
arylsulfataseRUNSL_RS20765Not AvailablePositive4887176 - 488871456976.2
gfo/idh/moca family proteinRUNSL_RS20770Not AvailablePositive4888761 - 489008049339.8

Displaying genes 4291 – 4300 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.