Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRUNSL_RS18915Not AvailableNegative4463140 - 446392528635.9
fe-s cluster assembly protein sufbRUNSL_RS18920Not AvailablePositive4464435 - 446588053642.4
fdhf/ydep family oxidoreductaseRUNSL_RS18925Not AvailablePositive4465983 - 446828384542.4
putative ig domain-containing proteinRUNSL_RS18930Not AvailablePositive4468533 - 4472279137699.0
gfo/idh/moca family proteinRUNSL_RS18935Not AvailableNegative4472355 - 447370149575.6
formylglycine-generating enzyme family proteinRUNSL_RS18940Not AvailableNegative4473868 - 447485437733.4
hypothetical proteinRUNSL_RS18945Not AvailableNegative4474924 - 447659163363.3
abc transporter atp-binding proteinRUNSL_RS18950Not AvailableNegative4476628 - 447740428739.3
nad(p)/fad-dependent oxidoreductaseRUNSL_RS18955Not AvailableNegative4477404 - 447851941831.4
sorbosone dehydrogenase family proteinRUNSL_RS18960Not AvailablePositive4478684 - 447987443339.7

Displaying genes 3921 – 3930 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.