Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i restriction endonuclease subunit rRUNSL_RS17195Not AvailablePositive4083152 - 4086367123673.0
hypothetical proteinRUNSL_RS17200Not AvailablePositive4086354 - 408754445131.6
thiamine diphosphokinaseRUNSL_RS17205Not AvailablePositive4087624 - 408828624627.6
mandelate racemase/muconate lactonizing enzyme family proteinRUNSL_RS17210Not AvailablePositive4088340 - 408944640302.2
duf6962 family proteinRUNSL_RS17215Not AvailableNegative4089465 - 409003720805.3
succinate--coa ligase subunit alphaRUNSL_RS17220Not AvailablePositive4090317 - 409119230103.8
duf4271 domain-containing proteinRUNSL_RS17225Not AvailablePositive4091285 - 409246045520.1
uroporphyrinogen-iii synthaseRUNSL_RS17230Not AvailablePositive4092492 - 409327430174.5
type ix secretion system membrane protein porp/sprfRUNSL_RS17235Not AvailablePositive4093438 - 409440935409.4
sumf1/egtb/pvdo family nonheme iron enzymeRUNSL_RS17240Not AvailablePositive4094671 - 409578041791.9

Displaying genes 3571 – 3580 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.