Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_03225RUNSL_RS16125Not AvailablePositive3844941 - 3845531Not Available
nad(p)/fad-dependent oxidoreductaseRUNSL_RS16130Not AvailablePositive3845948 - 384728850389.2
is1 family transposaseRUNSL_RS31235Not AvailablePositive3847482 - 384784713471.4
atp-dependent endonucleaseRUNSL_RS16135Not AvailableNegative3848283 - 384979457872.2
helix-turn-helix domain-containing proteinRUNSL_RS29625Not AvailableNegative3849834 - 385036720249.3
site-specific integraseRUNSL_RS16150Not AvailablePositive3850767 - 385204148776.3
vape domain-containing proteinRUNSL_RS16155Not AvailablePositive3852154 - 385333545563.1
toprim domain-containing proteinRUNSL_RS16160Not AvailablePositive3853685 - 385455732663.4
antiviral reverse transcriptase drt2RUNSL_RS16170Not AvailableNegative3854989 - 385646758677.0
Trna-serNot AvailableNot AvailablePositive3857277 - 3857366Not Available

Displaying genes 3361 – 3370 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.