Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
potassium-transporting atpase subunit kdpbRUNSL_RS14890Not AvailableNegative3528501 - 353055573236.6
hypothetical proteinRUNSL_RS14895Not AvailablePositive3530591 - 353089011625.8
duf6516 family proteinRUNSL_RS14900Not AvailablePositive3530890 - 353124613463.3
potassium-transporting atpase subunit kdpaRUNSL_RS14905Not AvailableNegative3531233 - 353298763981.1
k(+)-transporting atpase subunit fRUNSL_RS31940Not AvailableNegative3533042 - 35331223098.06
sigma-54 dependent transcriptional regulatorRUNSL_RS14910Not AvailableNegative3533401 - 353473249721.2
utp--glucose-1-phosphate uridylyltransferase galuRUNSL_RS14915Not AvailableNegative3534807 - 353568232714.5
m28 family peptidaseRUNSL_RS14920Not AvailableNegative3535747 - 353723153489.5
homoserine kinaseRUNSL_RS14925Not AvailableNegative3537451 - 353838633346.4
hepn domain-containing proteinRUNSL_RS14930Not AvailableNegative3538467 - 353878412274.5

Displaying genes 3111 – 3120 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.