Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinRUNSL_RS12855Not AvailablePositive3029291 - 303082057055.7
glycosyl hydrolase family 95 catalytic domain-containing proteinRUNSL_RS12860Not AvailablePositive3030927 - 303320986263.0
alpha-l-fucosidaseRUNSL_RS12865Not AvailablePositive3033256 - 303492963095.2
sulfataseRUNSL_RS12870Not AvailablePositive3034952 - 303646356707.0
alpha-l-fucosidaseRUNSL_RS12875Not AvailablePositive3036518 - 303791553218.8
enolase c-terminal domain-like proteinRUNSL_RS12880Not AvailablePositive3037950 - 303917645326.8
sdr family nad(p)-dependent oxidoreductaseRUNSL_RS12885Not AvailablePositive3039189 - 303995327188.7
l-rhamnose mutarotaseRUNSL_RS12890Not AvailablePositive3039959 - 304031513668.5
l-fucose:h+ symporter permeaseRUNSL_RS12895Not AvailablePositive3040303 - 304154744958.5
alpha-l-fucosidaseRUNSL_RS12900Not AvailablePositive3041563 - 304328164666.9

Displaying genes 2701 – 2710 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.