Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m43 family zinc metalloproteaseRUNSL_RS12465Not AvailablePositive2922894 - 292527286662.2
hepn domain-containing proteinRUNSL_RS12470Not AvailablePositive2925532 - 292770380617.0
uroporphyrinogen-iii c-methyltransferaseRUNSL_RS12475Not AvailablePositive2927717 - 292846026549.3
molybdopterin-synthase adenylyltransferase moebRUNSL_RS12480Not AvailablePositive2928646 - 292973139733.4
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdRUNSL_RS12485Not AvailablePositive2929735 - 293043026311.3
duf6766 family proteinRUNSL_RS12490Not AvailablePositive2930487 - 293115225515.3
hypothetical proteinRUNSL_RS12495Not AvailableNegative2931188 - 293167918554.8
sdr family nad(p)-dependent oxidoreductaseRUNSL_RS12500Not AvailableNegative2931722 - 293248627604.4
fad-dependent oxidoreductaseRUNSL_RS12505Not AvailableNegative2932533 - 293415859443.4
aminotransferase class v-fold plp-dependent enzymeRUNSL_RS31825Not AvailablePositive2934434 - 29346828749.53

Displaying genes 2621 – 2630 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.