Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aspartate aminotransferase family proteinRUNSL_RS12015Not AvailableNegative2804955 - 280611543518.2
cell wall metabolism sensor histidine kinase walkRUNSL_RS12020Not AvailableNegative2806211 - 280764155035.4
response regulator transcription factorRUNSL_RS12025Not AvailableNegative2807641 - 280831525532.0
pqq-dependent sugar dehydrogenaseRUNSL_RS12030Not AvailablePositive2808577 - 2811432104466.0
sugar phosphate isomerase/epimeraseRUNSL_RS12035Not AvailablePositive2811536 - 281246534054.0
nrtr dna-binding winged helix domain-containing proteinRUNSL_RS12040Not AvailableNegative2812575 - 281330628271.3
tonb-dependent receptorRUNSL_RS12045Not AvailablePositive2813956 - 2817186116051.0
ragb/susd family nutrient uptake outer membrane proteinRUNSL_RS12050Not AvailablePositive2817218 - 281895463621.7
vcbs repeat-containing proteinRUNSL_RS12055Not AvailablePositive2819106 - 2822657130915.0
peptidase domain-containing abc transporterRUNSL_RS12060Not AvailableNegative2822728 - 282493582612.1

Displaying genes 2531 – 2540 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.