Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tyrosine-protein phosphataseRUNSL_RS07355Not AvailablePositive1705933 - 170667928352.1
polysaccharide biosynthesis tyrosine autokinaseRUNSL_RS07360Not AvailablePositive1706757 - 170915091759.4
tetratricopeptide repeat proteinRUNSL_RS07365Not AvailablePositive1709611 - 171030625384.0
pfkb family carbohydrate kinaseRUNSL_RS07370Not AvailablePositive1710408 - 171132233526.4
type ii caax prenyl endopeptidase rce1 family proteinRUNSL_RS07375Not AvailablePositive1711409 - 171225432959.8
porphobilinogen synthaseRUNSL_RS07380Not AvailablePositive1712285 - 171326536369.6
fasciclin domain-containing proteinRUNSL_RS07385Not AvailablePositive1713386 - 171432733125.1
hypothetical proteinRUNSL_RS07390Not AvailablePositive1714389 - 171488918623.4
penicillin-binding protein 1cRUNSL_RS07395Not AvailableNegative1714895 - 171721687334.6
duf4286 family proteinRUNSL_RS07400Not AvailableNegative1717260 - 171756212029.6

Displaying genes 1591 – 1600 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.