Runella slithyformis DSM 19594

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella slithyformis DSM 19594.This organism is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella slithyformis
StrainDSM 19594

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella slithyformis DSM 19594 plasmid pRUNSL05, complete

Gene Summary

Adenine Count

10807 bp

Thymine Count

10841 bp

Guanine Count

8473 bp

Cytosine Count

8663 bp

Genome Length

38784 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfite oxidaseRUNSL_RS04830Not AvailableNegative1140420 - 114165245375.9
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeRUNSL_RS04835Not AvailablePositive1142035 - 114315341791.5
hypothetical proteinRUNSL_RS04840Not AvailablePositive1143286 - 114398726296.7
marr family winged helix-turn-helix transcriptional regulatorRUNSL_RS04845Not AvailablePositive1144125 - 114459518423.4
tetr/acrr family transcriptional regulatorRUNSL_RS04850Not AvailablePositive1145014 - 114566424980.4
tolc family proteinRUNSL_RS04855Not AvailablePositive1145728 - 114708350862.9
efflux rnd transporter periplasmic adaptor subunitRUNSL_RS04860Not AvailablePositive1147154 - 114829041112.8
efflux rnd transporter permease subunitRUNSL_RS04865Not AvailablePositive1148309 - 1151785127359.0
peptide-methionine (r)-s-oxide reductase msrbRUNSL_RS04870Not AvailableNegative1151871 - 115229015980.7
duf5615 family pin-like proteinRUNSL_RS04875Not AvailableNegative1152397 - 115275914112.0

Displaying genes 1081 – 1090 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.