Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (uracil(1498)-n(3))-methyltransferasePP1Y_RS08740Not AvailableNegative533369 - 53412727060.8
4-hydroxybenzoate octaprenyltransferasePP1Y_RS08745Not AvailablePositive534237 - 53518734983.8
sos response-associated peptidasePP1Y_RS08750Not AvailablePositive535199 - 53584323864.6
voc family proteinPP1Y_RS08755Not AvailableNegative535852 - 53622313917.2
redox-sensitive transcriptional activator soxrPP1Y_RS08760Not AvailablePositive536334 - 53678616696.4
chromosome segregation protein smcPP1Y_RS08765Not AvailableNegative536787 - 540221122933.0
dsba family proteinPP1Y_RS08770Not AvailableNegative540255 - 54101326849.0
dsba family proteinPP1Y_RS08775Not AvailableNegative541143 - 54192528182.9
duf721 domain-containing proteinPP1Y_RS08780Not AvailableNegative541925 - 54247920413.7
a/g-specific adenine glycosylasePP1Y_RS08785Not AvailablePositive542509 - 54356738345.7

Displaying genes 781 – 790 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.