Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Mpl, complete sequence.

Gene Summary

Adenine Count

217632 bp

Thymine Count

220025 bp

Guanine Count

361649 bp

Cytosine Count

362296 bp

Genome Length

1161602 bp

Protein-coding Genes

1008 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
parb/repb/spo0j family partition proteinPP1Y_RS00270Not AvailablePositive900 - 299976603.8
toprim domain-containing proteinPP1Y_RS00275Not AvailablePositive3101 - 415337867.3
duf2493 domain-containing proteinPP1Y_RS00280Not AvailablePositive4471 - 539434635.9
higa family addiction module antitoxinPP1Y_RS00285Not AvailableNegative5886 - 617310742.1
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS00290Not AvailableNegative6185 - 646610399.4
abi family proteinPP1Y_RS00295Not AvailableNegative6764 - 770536309.8
abrb/maze/spovt family dna-binding domain-containing proteinPP1Y_RS00300Not AvailablePositive8043 - 82708051.95
type ii toxin-antitoxin system death-on-curing family toxinPP1Y_RS00305Not AvailablePositive8272 - 866114109.8
cdp-alcohol phosphatidyltransferase family proteinPP1Y_RS00310Not AvailableNegative8778 - 951527130.8
hypothetical proteinPP1Y_RS26085Not AvailablePositive10381 - 105455805.8

Displaying genes 1 – 10 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.