Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferasePP1Y_RS08105Not AvailablePositive399927 - 40039417262.9
gnat family n-acetyltransferasePP1Y_RS08110Not AvailablePositive400490 - 40100818966.7
zinc transporter zntbPP1Y_RS08115Not AvailableNegative401016 - 40202637817.3
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthasePP1Y_RS08120Not AvailablePositive402144 - 40326839732.5
tigr02281 family clan aa aspartic proteasePP1Y_RS08125Not AvailablePositive403339 - 40387518703.3
hypothetical proteinPP1Y_RS26485Not AvailableNegative403888 - 4040224398.29
mfs transporterPP1Y_RS08130Not AvailableNegative404137 - 40533341470.7
dna-directed rna polymerase subunit beta'PP1Y_RS08135Not AvailableNegative405511 - 409803158101.0
dna-directed rna polymerase subunit betaPP1Y_RS08140Not AvailableNegative409882 - 414036153663.0
hypothetical proteinPP1Y_RS08145Not AvailablePositive414607 - 41577939268.0

Displaying genes 651 – 660 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.