Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase family proteinPP1Y_RS00510Not AvailableNegative48080 - 5014376942.1
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS24965Not AvailablePositive50676 - 508134801.7
gdp-mannose 4,6-dehydratasePP1Y_RS00520Not AvailablePositive51014 - 5204838624.0
gdp-mannose 4,6-dehydratasePP1Y_RS00525Not AvailablePositive52145 - 5304132139.6
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS26210Not AvailableNegative53248 - 5383521563.8
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS26215Not AvailableNegative53825 - 539173332.12
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS26220Not AvailableNegative53892 - 5443020008.0
hypothetical proteinPP1Y_RS00535Not AvailablePositive54761 - 5521016022.3
glycosyltransferasePP1Y_RS00540Not AvailablePositive55210 - 58983140109.0
right-handed parallel beta-helix repeat-containing proteinPP1Y_RS24970Not AvailableNegative59037 - 5986429513.2

Displaying genes 51 – 60 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.