Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb3 family type iv secretion system proteinPP1Y_RS07535Not AvailablePositive284576 - 2848459603.85
conjugal transfer protein trbePP1Y_RS07540Not AvailablePositive284842 - 28729889243.5
p-type conjugative transfer protein trbjPP1Y_RS07545Not AvailablePositive287295 - 28801425470.2
putative entry exclusion protein trbk-altPP1Y_RS07550Not AvailablePositive288016 - 2882709056.67
p-type conjugative transfer protein trblPP1Y_RS07555Not AvailablePositive288267 - 28954742153.4
conjugal transfer protein trbfPP1Y_RS07560Not AvailablePositive289569 - 29025225344.0
p-type conjugative transfer protein trbgPP1Y_RS07565Not AvailablePositive290249 - 29116633818.3
trbi/virb10 family proteinPP1Y_RS07570Not AvailablePositive291163 - 29248846040.4
duf2274 domain-containing proteinPP1Y_RS07575Not AvailablePositive292485 - 2927128200.05
lysr family transcriptional regulatorPP1Y_RS07580Not AvailableNegative292700 - 29359633175.5

Displaying genes 571 – 580 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.