Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2171 domain-containing proteinPP1Y_RS07340Not AvailableNegative254916 - 2551769143.72
ribonucleotide-diphosphate reductase subunit betaPP1Y_RS07345Not AvailablePositive255582 - 25663440787.4
duf4870 family proteinPP1Y_RS07350Not AvailableNegative257128 - 25749613430.7
nupc/nupg family nucleoside cnt transporterPP1Y_RS07355Not AvailableNegative257631 - 25889343466.0
queuosine precursor transporterPP1Y_RS07360Not AvailablePositive258998 - 25967823931.0
acetylglutamate kinasePP1Y_RS07365Not AvailablePositive259689 - 26058831144.7
hypothetical proteinPP1Y_RS07370Not AvailablePositive260635 - 26118919377.8
yggt family proteinPP1Y_RS07375Not AvailablePositive261295 - 26158810954.0
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldPP1Y_RS07380Not AvailablePositive261588 - 26248430955.8
hypothetical proteinPP1Y_RS07385Not AvailablePositive262481 - 26320325940.8

Displaying genes 531 – 540 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.