Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine synthasePP1Y_RS07140Not AvailableNegative212281 - 21295223981.0
threonine--trna ligasePP1Y_RS07145Not AvailableNegative212949 - 21494975215.5
alpha/beta hydrolasePP1Y_RS07150Not AvailablePositive215261 - 21600726688.1
tetratricopeptide repeat proteinPP1Y_RS07155Not AvailablePositive216024 - 21689930085.7
llm class flavin-dependent oxidoreductasePP1Y_RS07160Not AvailablePositive216896 - 21788834706.6
dicamba o-demethylase ferredoxin reductase subunit ddmaPP1Y_RS07165Not AvailablePositive218023 - 21924943584.2
trna epoxyqueuosine(34) reductase quegPP1Y_RS07170Not AvailableNegative219298 - 22038339370.9
abc transporter atp-binding proteinPP1Y_RS07175Not AvailablePositive220459 - 22146936210.7
abc transporter permeasePP1Y_RS07180Not AvailablePositive221466 - 22272245346.2
peptide-methionine (r)-s-oxide reductase msrbPP1Y_RS07185Not AvailablePositive222831 - 22332217740.1

Displaying genes 491 – 500 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.