Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative entry exclusion protein trbk-altPP1Y_RS26575Not AvailableNegative39758 - 4007211167.5
p-type conjugative transfer protein trbjPP1Y_RS00460Not AvailableNegative40017 - 4073925610.0
conjugal transfer protein trbePP1Y_RS00465Not AvailableNegative40746 - 4317288600.6
virb3 family type iv secretion system proteinPP1Y_RS00470Not AvailableNegative43169 - 434419752.05
trbc/virb2 family proteinPP1Y_RS00475Not AvailableNegative43441 - 4377311437.1
p-type conjugative transfer atpase trbbPP1Y_RS00480Not AvailableNegative43770 - 4475635063.6
recombinase family proteinPP1Y_RS24955Not AvailableNegative45360 - 456179203.08
sterol desaturase family proteinPP1Y_RS00490Not AvailableNegative45786 - 4640323480.7
2-dehydro-3-deoxyphosphooctonate aldolasePP1Y_RS24960Not AvailableNegative46525 - 4703418422.0
type ii toxin-antitoxin system rele/pare family toxinPP1Y_RS00505Not AvailablePositive47020 - 4806236438.2

Displaying genes 41 – 50 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.