Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidohydrolase family proteinPP1Y_RS07050Not AvailablePositive195586 - 19678843660.9
duf2474 domain-containing proteinPP1Y_RS25290Not AvailableNegative196814 - 1969454962.22
cytochrome d ubiquinol oxidase subunit iiPP1Y_RS07055Not AvailableNegative196945 - 19795236914.5
cytochrome ubiquinol oxidase subunit iPP1Y_RS07060Not AvailableNegative197958 - 19936751303.8
hypothetical proteinPP1Y_RS07065Not AvailableNegative199472 - 1996516832.36
sulfite exporter taue/safe family proteinPP1Y_RS07070Not AvailableNegative199648 - 20043926393.0
bifunctional protein tyrosine phosphatase family protein/nad(p)/fad-dependent oxidoreductasePP1Y_RS07075Not AvailableNegative200458 - 20201755315.3
duf6691 family proteinPP1Y_RS07080Not AvailableNegative202049 - 20246514138.8
yeee/yede family proteinPP1Y_RS07085Not AvailableNegative202467 - 20291014319.0
mbl fold metallo-hydrolasePP1Y_RS07090Not AvailableNegative202922 - 20384833512.6

Displaying genes 471 – 480 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.