Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome-c oxidase, cbb3-type subunit iiPP1Y_RS07000Not AvailablePositive187245 - 18799427808.9
cbb3-type cytochrome c oxidase subunit 3PP1Y_RS07005Not AvailablePositive187991 - 1881616434.82
cytochrome-c oxidase, cbb3-type subunit iiiPP1Y_RS07010Not AvailablePositive188154 - 18910133559.2
cytochrome c oxidase accessory protein ccogPP1Y_RS07015Not AvailablePositive189138 - 19059554593.0
fixh family proteinPP1Y_RS07020Not AvailablePositive190592 - 19105016820.1
heavy metal translocating p-type atpasePP1Y_RS07025Not AvailablePositive191047 - 19319474294.0
cbb3-type cytochrome oxidase assembly protein ccosPP1Y_RS07030Not AvailablePositive193191 - 1933585904.08
hypothetical proteinPP1Y_RS07035Not AvailablePositive193355 - 1935767319.04
oxygen-independent coproporphyrinogen iii oxidasePP1Y_RS07040Not AvailablePositive193609 - 19492248097.6
pilz domain-containing proteinPP1Y_RS07045Not AvailableNegative194942 - 19521410094.9

Displaying genes 461 – 470 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.