Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb-dependent receptorPP1Y_RS00415Not AvailablePositive27525 - 3011092590.8
atxe2 family lasso peptide isopeptidasePP1Y_RS00420Not AvailablePositive30263 - 3226073494.9
asparagine synthase-related proteinPP1Y_RS00425Not AvailableNegative32315 - 3406963695.1
lasso peptide biosynthesis b2 proteinPP1Y_RS00430Not AvailableNegative34066 - 3473424472.1
benenodin family lasso peptidePP1Y_RS25615Not AvailableNegative34785 - 349224775.52
duf2274 domain-containing proteinPP1Y_RS00435Not AvailableNegative35217 - 354448645.57
trbi/virb10 family proteinPP1Y_RS00440Not AvailableNegative35441 - 3678147267.0
p-type conjugative transfer protein trbgPP1Y_RS00445Not AvailableNegative36778 - 3779437137.6
conjugal transfer protein trbfPP1Y_RS00450Not AvailableNegative37791 - 3847425316.1
p-type conjugative transfer protein trblPP1Y_RS00455Not AvailableNegative38478 - 3976142557.7

Displaying genes 31 – 40 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.