Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lps export abc transporter periplasmic protein lptcPP1Y_RS06610Not AvailableNegative94574 - 9522123028.9
ribonuclease dPP1Y_RS06615Not AvailableNegative95228 - 9585123034.5
uracil-dna glycosylasePP1Y_RS06620Not AvailablePositive95944 - 9663324404.9
glutamate synthase subunit betaPP1Y_RS06625Not AvailableNegative96852 - 9828552302.4
glutamate synthase large subunitPP1Y_RS06630Not AvailableNegative98306 - 102946168656.0
hypothetical proteinPP1Y_RS06635Not AvailableNegative103268 - 10546078197.6
tigr04063 family pep-cterm/xrta system glycosyltransferasePP1Y_RS06640Not AvailableNegative105488 - 10672944850.9
hypothetical proteinPP1Y_RS06645Not AvailablePositive106796 - 1069846564.98
putative o-glycosylation ligase, exosortase a system-associatedPP1Y_RS06650Not AvailablePositive106977 - 10834450480.6
response regulator transcription factor ctraPP1Y_RS06655Not AvailablePositive108547 - 10924225837.4

Displaying genes 381 – 390 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.