Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s41 family peptidasePP1Y_RS06460Not AvailableNegative64075 - 6543949021.2
murein hydrolase activator envc family proteinPP1Y_RS06465Not AvailableNegative65584 - 6683144682.1
ompa family proteinPP1Y_RS06470Not AvailableNegative66996 - 6767023174.5
hemolysin family proteinPP1Y_RS06480Not AvailablePositive67866 - 6920047602.0
duf3035 domain-containing proteinPP1Y_RS06485Not AvailableNegative69305 - 6972114370.1
signal peptidase iiPP1Y_RS06490Not AvailableNegative69726 - 7023218615.0
isoleucine--trna ligasePP1Y_RS06495Not AvailableNegative70241 - 73108107568.0
bifunctional riboflavin kinase/fad synthetasePP1Y_RS06500Not AvailableNegative73334 - 7426633719.2
dihydrofolate reductasePP1Y_RS24625Not AvailableNegative74303 - 7496824802.8
5-(carboxyamino)imidazole ribonucleotide synthasePP1Y_RS06510Not AvailableNegative75028 - 7608637423.5

Displaying genes 351 – 360 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.