Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adp-forming succinate--coa ligase subunit betaPP1Y_RS06360Not AvailablePositive44019 - 4521842388.3
electron transfer flavoprotein subunit beta/fixa family proteinPP1Y_RS06365Not AvailablePositive45455 - 4620126437.4
electron transfer flavoprotein subunit alpha/fixb family proteinPP1Y_RS06370Not AvailablePositive46204 - 4713331599.8
gnat family n-acetyltransferasePP1Y_RS06375Not AvailableNegative47215 - 4773019401.1
duf445 domain-containing proteinPP1Y_RS06380Not AvailableNegative47748 - 4896844879.0
efflux rnd transporter permease subunitPP1Y_RS06385Not AvailableNegative49065 - 52505122931.0
efflux rnd transporter periplasmic adaptor subunitPP1Y_RS06390Not AvailableNegative52515 - 5371442083.2
duf1153 domain-containing proteinPP1Y_RS06395Not AvailableNegative54015 - 5431411479.8
hypothetical proteinPP1Y_RS06400Not AvailableNegative54317 - 5464911638.5
trna 2-thiouridine(34) synthase mnmaPP1Y_RS06405Not AvailablePositive54786 - 5596141691.8

Displaying genes 331 – 340 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.