Novosphingobium sp. PP1Y

Gram-negativeBacilliMotileObligate aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. PP1Y is a marine bacteria specifically adapted to use fuels as energy source. It is able to grow on a wide range of mono-, poly- and heterocyclic aromatic hydrocarbons. (NCBI BioProject: bp_list[1])

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. PP1Y
Strainsp. PP1Y

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Novosphingobium sp. PP1Y
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate aerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. PP1Y plasmid Lpl, complete sequence.

Gene Summary

Adenine Count

37629 bp

Thymine Count

37847 bp

Guanine Count

58360 bp

Cytosine Count

58267 bp

Genome Length

192103 bp

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-dependent sugar dehydrogenasePP1Y_RS06210Not AvailablePositive14832 - 1629553071.0
duf815 domain-containing proteinPP1Y_RS06215Not AvailableNegative16306 - 1713029900.4
l-threonylcarbamoyladenylate synthasePP1Y_RS06220Not AvailablePositive17222 - 1818733209.6
hypothetical proteinPP1Y_RS06225Not AvailableNegative18206 - 1852311670.0
card family transcriptional regulatorPP1Y_RS06230Not AvailableNegative18712 - 1924520180.2
ferredoxin fdxaPP1Y_RS06235Not AvailableNegative19570 - 1990812557.6
rna-binding s4 domain-containing proteinPP1Y_RS06240Not AvailableNegative19928 - 2022110736.1
helicase-related proteinPP1Y_RS06245Not AvailableNegative20251 - 2281593610.9
m23 family metallopeptidasePP1Y_RS06250Not AvailablePositive22982 - 2464359276.3
porphobilinogen synthasePP1Y_RS06255Not AvailablePositive24716 - 2571135773.4

Displaying genes 301 – 310 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.